Our lab has been using hifiasm for a number of genome assembly projects. We are using Nanopore reads (kit 14 chemistry, R10.4.1 flow cells) that have been error-corrected with PECAT or HERRO. Most of ...
His Excellency Philemon Yang, former Prime Minister of Cameroon, was elected to serve as President of the 79th Session of the General Assembly. The election took place at United Nations Headquarters, ...
Abstract: We have developed a Windows-based program, ConPath, as a scaffold analyzer which constructs scaffolds by ordering and orienting separate sequence contigs by exploiting the mate-pair ...
Identification of plasmids from sequencing data is an important and challenging problem related to antimicrobial resistance spread and other One-Health issues. We provide a new architecture for ...
With the increase in single-base accuracy and read length, single-molecule long-read sequencing technologies using bulk samples have been widely used in genome assembly. Usually, the long-read ...
My name is Amit, and I am working on different plant genomes using HiFi reads. First of all, thank you so much for developing such an amazing tool. I am sorry for the title of the question, but the ...
Chondrichthyes (cartilaginous fishes) are fundamental for understanding vertebrate evolution, yet their genomes are understudied. We report long-read sequencing of the whale shark genome to generate ...
Metagenomes can be considered as mixtures of viral, bacterial, and other eukaryotic DNA sequences. Mining viral sequences from metagenomes could shed insight into virus–host relationships and expand ...
The axolotl is an important model organism because it is a tetrapod with a similar body plan to humans. Unlike humans, the axolotl regenerates limbs and other complex tissues. Therefore, the axolotl ...
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